From Prevailing to Peculiar, Phage Evolution and Diversity at its Finest
Submission Type
Event
Faculty Advisor
Richard Alvey
Expected Graduation Date
2021
Location
Center for Natural Sciences, Illinois Wesleyan University
Start Date
4-21-2018 2:00 PM
End Date
4-21-2018 3:00 PM
Disciplines
Education
Abstract
In the field of microbiology, bacteriophages, viruses that infect bacteria, are becoming an extensive subject of study. The purpose of this research was to isolate and discover unknown phages from the environment to compare them to known phages in order to understand their evolution and diversity. After isolating these phages from soil and water samples, we then examined and analyzed them in the laboratory. One Mycobacterium smegmatis (Ms) phage from a soil sample and two Rhodobacter capsulatus (Rc) phages from water samples were discovered. A variety of tests were conducted to study these phages such as examining morphology, host range testing, lysogen testing, PCR tests, and ultimately DNA sequencing. Our bioinformatic analysis and experimental data revealed that Doddsville (an Ms phage) is a relatively common B1 phage with a large head and long tail. The data also showed that SchuylerLagoon and Bellator (Rc phages) both had a smaller head and no tail, which is unique to the phages known. They are thought to be a type of singleton that have a single-stranded genome. With our analysis of Doddsville, Bellator, and SchuylerLagoon, we have contributed to the research in understanding phage diversity and viruses as a whole in the scientific community.
From Prevailing to Peculiar, Phage Evolution and Diversity at its Finest
Center for Natural Sciences, Illinois Wesleyan University
In the field of microbiology, bacteriophages, viruses that infect bacteria, are becoming an extensive subject of study. The purpose of this research was to isolate and discover unknown phages from the environment to compare them to known phages in order to understand their evolution and diversity. After isolating these phages from soil and water samples, we then examined and analyzed them in the laboratory. One Mycobacterium smegmatis (Ms) phage from a soil sample and two Rhodobacter capsulatus (Rc) phages from water samples were discovered. A variety of tests were conducted to study these phages such as examining morphology, host range testing, lysogen testing, PCR tests, and ultimately DNA sequencing. Our bioinformatic analysis and experimental data revealed that Doddsville (an Ms phage) is a relatively common B1 phage with a large head and long tail. The data also showed that SchuylerLagoon and Bellator (Rc phages) both had a smaller head and no tail, which is unique to the phages known. They are thought to be a type of singleton that have a single-stranded genome. With our analysis of Doddsville, Bellator, and SchuylerLagoon, we have contributed to the research in understanding phage diversity and viruses as a whole in the scientific community.